PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E01579.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 177aa    MW: 20006.2 Da    PI: 5.6909
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E01579.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY985.9e-31113171159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       l+Dg++WrKYG+K+vk+s++pr+YY+C+ +gC+vkk+ver+++dp++v++tYeg Hnh+
  Migut.E01579.1.p 113 LNDGFKWRKYGKKMVKNSPNPRNYYKCSIEGCSVKKRVERDKDDPTYVVTTYEGIHNHQ 171
                       58********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-32100172IPR003657WRKY domain
SuperFamilySSF1182907.45E-28106173IPR003657WRKY domain
PROSITE profilePS5081130.194108173IPR003657WRKY domain
SMARTSM007743.0E-34113172IPR003657WRKY domain
PfamPF031065.9E-24114171IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009867Biological Processjasmonic acid mediated signaling pathway
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MQTHLMIMAD NYTNTNLPYE TDFEVSDFLE FNDWIEEGPP LSFSSISADY NIPQNPNYAS  60
NEIMMNSGAS GISSSSSSSI HEGNITRDSG SGREKKEIRE KVAFKTKSEI EVLNDGFKWR  120
KYGKKMVKNS PNPRNYYKCS IEGCSVKKRV ERDKDDPTYV VTTYEGIHNH QGPPQL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lex_A3e-26103173777Probable WRKY transcription factor 4
1wj2_A3e-26103173777Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00531DAPTransfer from AT5G26170Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847225.11e-130PREDICTED: probable WRKY transcription factor 50
TrEMBLA0A022QS591e-119A0A022QS59_ERYGU; Uncharacterized protein
STRINGVIT_04s0008g01470.t012e-54(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21242462
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.12e-42WRKY DNA-binding protein 50